Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CD58_RS17125 | Not Available | Negative | 4068931 - 4069818 | 32506.7 |
| sdr family oxidoreductase | CD58_RS17130 | Not Available | Positive | 4069918 - 4070742 | 29377.0 |
| ntp/ndp exchange transporter | CD58_RS17135 | Not Available | Negative | 4070788 - 4072110 | 47397.9 |
| oxidoreductase | CD58_RS17140 | Not Available | Negative | 4072179 - 4073231 | 37307.3 |
| duf2790 domain-containing protein | CD58_RS31465 | Not Available | Negative | 4073276 - 4073428 | 5649.98 |
| heavy metal sensor histidine kinase | CD58_RS17150 | Not Available | Negative | 4073705 - 4075078 | 50582.0 |
| heavy metal response regulator transcription factor | CD58_RS17155 | Not Available | Negative | 4075078 - 4075782 | 26299.8 |
| voc family protein | CD58_RS17160 | Not Available | Negative | 4076084 - 4076476 | 14369.1 |
| glutathione transferase | CD58_RS17165 | Not Available | Positive | 4076655 - 4077287 | 23735.4 |
| abc transporter atp-binding protein | CD58_RS17170 | Not Available | Positive | 4077415 - 4079268 | 67648.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
