Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | CD58_RS17075 | Not Available | Negative | 4060148 - 4061524 | 48993.5 |
| (2fe-2s)-binding protein | CD58_RS17080 | Not Available | Negative | 4061521 - 4061874 | 12754.4 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS17085 | Not Available | Negative | 4061864 - 4063006 | 40910.0 |
| abc transporter permease | CD58_RS17090 | Not Available | Negative | 4063003 - 4063800 | 29114.6 |
| abc transporter permease | CD58_RS17095 | Not Available | Negative | 4063807 - 4064679 | 31260.6 |
| abc transporter atp-binding protein | CD58_RS17100 | Not Available | Negative | 4064666 - 4065739 | 39724.1 |
| abc transporter substrate-binding protein | CD58_RS17105 | Not Available | Negative | 4065807 - 4066886 | 39052.0 |
| lysr substrate-binding domain-containing protein | CD58_RS17110 | Not Available | Positive | 4067112 - 4068005 | 32614.5 |
| hypothetical protein | CD58_RS17115 | Not Available | Negative | 4068043 - 4068285 | 8768.65 |
| duf1810 domain-containing protein | CD58_RS17120 | Not Available | Negative | 4068396 - 4068827 | 16521.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
