Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | CD58_RS17025 | Not Available | Positive | 4047006 - 4048460 | 51017.8 |
| cytochrome b | CD58_RS17030 | Not Available | Positive | 4048561 - 4049124 | 21664.9 |
| eal domain-containing protein | CD58_RS17035 | Not Available | Negative | 4049160 - 4052189 | 112901.0 |
| substrate-binding domain-containing protein | CD58_RS17040 | Not Available | Negative | 4052177 - 4053196 | 36057.1 |
| hypothetical protein | CD58_RS17045 | Not Available | Positive | 4053615 - 4054340 | 26055.4 |
| glycolate oxidase subunit glcd | CD58_RS17050 | Not Available | Positive | 4054748 - 4056247 | 53834.9 |
| glycolate oxidase subunit glce | CD58_RS17055 | Not Available | Positive | 4056247 - 4057311 | 38594.0 |
| glycolate oxidase subunit glcf | CD58_RS17060 | Not Available | Positive | 4057315 - 4058535 | 44032.8 |
| rida family protein | CD58_RS17065 | Not Available | Negative | 4058614 - 4058967 | 12725.2 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS17070 | Not Available | Negative | 4058977 - 4060155 | 41626.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
