Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oprd family porin | CD58_RS16975 | Not Available | Negative | 4035570 - 4036823 | 45435.3 |
| citmhs family transporter | CD58_RS16980 | Not Available | Negative | 4036918 - 4038222 | 46139.9 |
| 4-oxalomesaconate tautomerase | CD58_RS16985 | Not Available | Negative | 4038340 - 4039422 | 38012.2 |
| lysr family transcriptional regulator | CD58_RS16990 | Not Available | Positive | 4039591 - 4040481 | 33106.1 |
| hypothetical protein | CD58_RS16995 | Not Available | Positive | 4040814 - 4041059 | 8921.02 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS17000 | Not Available | Positive | 4041191 - 4041970 | 27276.7 |
| apc family permease | CD58_RS17005 | Not Available | Negative | 4041999 - 4043447 | 51046.6 |
| iclr family transcriptional regulator | CD58_RS17010 | Not Available | Negative | 4043621 - 4044349 | 27073.8 |
| helix-turn-helix domain-containing protein | CD58_RS17015 | Not Available | Negative | 4044410 - 4045372 | 36112.2 |
| aspartate aminotransferase family protein | CD58_RS17020 | Not Available | Positive | 4045588 - 4046964 | 48994.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
