Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | CD58_RS16925 | Not Available | Negative | 4023950 - 4024888 | 34162.2 |
| lysr family transcriptional regulator | CD58_RS16930 | Not Available | Positive | 4025215 - 4026126 | 35056.9 |
| methyl-accepting chemotaxis protein | CD58_RS16935 | Not Available | Negative | 4026151 - 4028082 | 68902.0 |
| alpha/beta hydrolase family protein | CD58_RS16940 | Not Available | Positive | 4028478 - 4029635 | 43340.4 |
| thiamine pyrophosphate-binding protein | CD58_RS16945 | Not Available | Positive | 4030067 - 4031746 | 61256.3 |
| helix-turn-helix transcriptional regulator | CD58_RS16950 | Not Available | Negative | 4031762 - 4032580 | 30175.4 |
| kinase inhibitor | CD58_RS16955 | Not Available | Negative | 4032585 - 4033124 | 19031.6 |
| duf6434 domain-containing protein | CD58_RS16960 | Not Available | Negative | 4033504 - 4033719 | 8486.95 |
| lyse family translocator | CD58_RS16965 | Not Available | Negative | 4033903 - 4034511 | 21705.1 |
| lysr family transcriptional regulator | CD58_RS16970 | Not Available | Positive | 4034624 - 4035487 | 31279.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
