Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc protease | CD58_RS01255 | Not Available | Negative | 296661 - 297125 | 16941.7 |
| rna-binding s4 domain-containing protein | CD58_RS01260 | Not Available | Positive | 297376 - 297780 | 15020.8 |
| hsp33 family molecular chaperone hslo | CD58_RS01265 | Not Available | Positive | 298017 - 298919 | 33273.3 |
| phosphoenolpyruvate carboxykinase | CD58_RS01270 | Not Available | Positive | 299098 - 300642 | 55647.0 |
| hypothetical protein | CD58_RS01275 | Not Available | Negative | 300702 - 300947 | 9238.13 |
| s8 family peptidase | CD58_RS01280 | Not Available | Negative | 301090 - 302103 | 35569.9 |
| atp-dependent dna helicase recq | CD58_RS01285 | Not Available | Positive | 302409 - 304337 | 72261.5 |
| 3-hydroxyacyl-coa dehydrogenase | CD58_RS01290 | Not Available | Positive | 304445 - 305671 | 44575.5 |
| acyl-coa thioesterase | CD58_RS01295 | Not Available | Positive | 305723 - 306142 | 15498.2 |
| glycine zipper domain-containing protein | CD58_RS01300 | Not Available | Negative | 306228 - 306704 | 15256.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
