Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | CD58_RS16875 | Not Available | Negative | 4011335 - 4011907 | 20411.1 |
| pdr/vanb family oxidoreductase | CD58_RS16880 | Not Available | Negative | 4011990 - 4012943 | 34908.5 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | CD58_RS16885 | Not Available | Negative | 4012943 - 4013995 | 38776.0 |
| mfs transporter | CD58_RS16890 | Not Available | Negative | 4014045 - 4015247 | 41766.0 |
| efflux rnd transporter permease subunit | CD58_RS16895 | Not Available | Negative | 4015371 - 4017905 | 92602.6 |
| wd40/yvtn/bnr-like repeat-containing protein | CD58_RS16900 | Not Available | Negative | 4017910 - 4019013 | 38367.5 |
| duf1329 domain-containing protein | CD58_RS16905 | Not Available | Negative | 4019086 - 4020450 | 50205.1 |
| duf1302 domain-containing protein | CD58_RS16910 | Not Available | Negative | 4020463 - 4022142 | 60378.1 |
| fad-dependent oxidoreductase | CD58_RS16915 | Not Available | Negative | 4022269 - 4023393 | 40711.1 |
| rieske (2fe-2s) protein | CD58_RS16920 | Not Available | Negative | 4023572 - 4023934 | 13234.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
