Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | CD58_RS16825 | Not Available | Positive | 3999312 - 4001486 | 80909.0 |
| ethd domain-containing protein | CD58_RS16830 | Not Available | Positive | 4001734 - 4002462 | 27437.4 |
| fad-dependent oxidoreductase | CD58_RS16835 | Not Available | Negative | 4002536 - 4003669 | 41028.7 |
| nad-dependent succinate-semialdehyde dehydrogenase | CD58_RS16840 | Not Available | Negative | 4004025 - 4005494 | 53134.9 |
| dihydrodipicolinate synthase family protein | CD58_RS16845 | Not Available | Negative | 4005511 - 4006527 | 37411.0 |
| ornithine cyclodeaminase family protein | CD58_RS16850 | Not Available | Negative | 4006555 - 4007550 | 34653.0 |
| lysr family transcriptional regulator | CD58_RS16855 | Not Available | Negative | 4007665 - 4008573 | 32587.0 |
| cyclase family protein | CD58_RS16860 | Not Available | Negative | 4008576 - 4009361 | 28757.1 |
| nad-dependent epimerase/dehydratase family protein | CD58_RS16865 | Not Available | Negative | 4009348 - 4010355 | 36310.1 |
| fumarylacetoacetate hydrolase family protein | CD58_RS16870 | Not Available | Negative | 4010346 - 4011338 | 35859.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
