Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | CD58_RS16775 | Not Available | Positive | 3978568 - 3979575 | 35489.5 |
| oprd family porin | CD58_RS16780 | Not Available | Negative | 3979691 - 3980914 | 44861.6 |
| dihydrodipicolinate synthase family protein | CD58_RS16785 | Not Available | Negative | 3981131 - 3982060 | 33563.4 |
| mfs transporter | CD58_RS16790 | Not Available | Negative | 3982194 - 3983585 | 50741.6 |
| iclr family transcriptional regulator | CD58_RS16795 | Not Available | Negative | 3983704 - 3984555 | 30525.9 |
| doxx family protein | CD58_RS16800 | Not Available | Positive | 3984988 - 3985485 | 17676.1 |
| ig-like domain-containing protein | CD58_RS16805 | Not Available | Positive | 3985984 - 3995247 | 312467.0 |
| tolc family protein | CD58_RS16810 | Not Available | Positive | 3995292 - 3997184 | 69690.6 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS16815 | Not Available | Positive | 3997181 - 3997942 | 27034.7 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS16820 | Not Available | Positive | 3997939 - 3999315 | 50667.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
