Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CD58_RS16725 | Not Available | Positive | 3966445 - 3968496 | 73930.6 |
| mfs transporter | CD58_RS16730 | Not Available | Negative | 3968525 - 3969775 | 43041.2 |
| ureidoglycolate lyase | CD58_RS16735 | Not Available | Negative | 3969957 - 3970805 | 30519.3 |
| sdr family oxidoreductase | CD58_RS16740 | Not Available | Negative | 3970843 - 3971583 | 25470.7 |
| mfs transporter | CD58_RS16745 | Not Available | Negative | 3971580 - 3972959 | 50041.3 |
| lysr family transcriptional regulator | CD58_RS16750 | Not Available | Negative | 3973286 - 3974224 | 34790.6 |
| fumarylacetoacetate hydrolase family protein | CD58_RS16755 | Not Available | Positive | 3974341 - 3975522 | 41573.4 |
| ilvd/edd family dehydratase | CD58_RS16760 | Not Available | Positive | 3975570 - 3977354 | 63970.9 |
| ycek/yidq family lipoprotein | CD58_RS16765 | Not Available | Positive | 3977510 - 3977779 | 9417.46 |
| tetr/acrr family transcriptional regulator | CD58_RS16770 | Not Available | Negative | 3977856 - 3978458 | 21599.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
