Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | CD58_RS16675 | Not Available | Negative | 3953909 - 3954358 | 16526.7 |
| ycf48-related protein | CD58_RS16680 | Not Available | Negative | 3954370 - 3955410 | 38122.8 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS16685 | Not Available | Negative | 3955423 - 3956217 | 27989.0 |
| aldehyde dehydrogenase family protein | CD58_RS16690 | Not Available | Negative | 3956244 - 3957734 | 52882.6 |
| acetolactate synthase large subunit | CD58_RS16695 | Not Available | Negative | 3957745 - 3959286 | 54058.9 |
| iclr family transcriptional regulator | CD58_RS16700 | Not Available | Positive | 3959561 - 3960295 | 27632.3 |
| hypothetical protein | CD58_RS16705 | Not Available | Negative | 3960352 - 3961677 | 47772.3 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | CD58_RS16710 | Not Available | Negative | 3961759 - 3963108 | 48457.5 |
| aldehyde dehydrogenase family protein | CD58_RS16715 | Not Available | Negative | 3963120 - 3964541 | 51050.1 |
| metal abc transporter atp-binding protein | CD58_RS16720 | Not Available | Negative | 3964628 - 3966075 | 51726.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
