Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltransferase family protein | CD58_RS16625 | Not Available | Negative | 3943910 - 3945520 | 57804.9 |
| amino acid abc transporter atp-binding protein | CD58_RS16630 | Not Available | Negative | 3945598 - 3946377 | 28766.2 |
| amino acid abc transporter permease | CD58_RS16635 | Not Available | Negative | 3946380 - 3947156 | 28742.9 |
| abc transporter substrate-binding protein | CD58_RS16640 | Not Available | Negative | 3947169 - 3947975 | 29187.4 |
| gntr family transcriptional regulator | CD58_RS16645 | Not Available | Negative | 3948052 - 3948720 | 25109.4 |
| helix-turn-helix domain-containing protein | CD58_RS16650 | Not Available | Negative | 3948983 - 3949921 | 34816.9 |
| 2-keto-4-pentenoate hydratase | CD58_RS16655 | Not Available | Negative | 3950001 - 3950780 | 27924.8 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | CD58_RS16660 | Not Available | Negative | 3950777 - 3952384 | 59496.5 |
| alpha/beta fold hydrolase | CD58_RS16665 | Not Available | Negative | 3952387 - 3953250 | 31957.6 |
| amino acid synthesis family protein | CD58_RS16670 | Not Available | Negative | 3953278 - 3953880 | 21471.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
