Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2063 domain-containing protein | CD58_RS16575 | Not Available | Positive | 3934800 - 3935540 | 27102.3 |
| winged helix-turn-helix transcriptional regulator | CD58_RS16580 | Not Available | Negative | 3935553 - 3936050 | 19057.7 |
| isochorismatase family cysteine hydrolase | CD58_RS16585 | Not Available | Positive | 3936205 - 3936831 | 23391.6 |
| mfs transporter | CD58_RS16590 | Not Available | Positive | 3936842 - 3938050 | 41099.5 |
| voc family protein | CD58_RS16595 | Not Available | Negative | 3938186 - 3938737 | 20685.3 |
| purine-cytosine permease family protein | CD58_RS16600 | Not Available | Negative | 3938784 - 3940214 | 51407.0 |
| fmn-dependent nadh-azoreductase | CD58_RS16605 | Not Available | Positive | 3940547 - 3941215 | 24944.7 |
| lysr family transcriptional regulator | CD58_RS16610 | Not Available | Negative | 3941224 - 3942165 | 34626.5 |
| duf1989 domain-containing protein | CD58_RS16615 | Not Available | Negative | 3942254 - 3942868 | 22470.0 |
| lysr substrate-binding domain-containing protein | CD58_RS16620 | Not Available | Positive | 3942998 - 3943867 | 32097.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
