Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2986 domain-containing protein | CD58_RS29340 | Not Available | Positive | 3927541 - 3927702 | 5835.09 |
| nmra/hscarg family protein | CD58_RS16530 | Not Available | Negative | 3927853 - 3928722 | 30901.5 |
| lysr family transcriptional regulator | CD58_RS16535 | Not Available | Positive | 3928867 - 3929742 | 31588.6 |
| sdr family oxidoreductase | CD58_RS16540 | Not Available | Negative | 3929851 - 3930564 | 24719.5 |
| tetr/acrr family transcriptional regulator | CD58_RS16545 | Not Available | Positive | 3930640 - 3931230 | 20578.5 |
| winged helix-turn-helix transcriptional regulator | CD58_RS16550 | Not Available | Negative | 3931248 - 3931619 | 13616.6 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS16555 | Not Available | Positive | 3931728 - 3932462 | 24876.8 |
| hypothetical protein | CD58_RS16560 | Not Available | Negative | 3932573 - 3933091 | 18607.9 |
| hypothetical protein | CD58_RS16565 | Not Available | Positive | 3933430 - 3933894 | 16403.0 |
| duf692 domain-containing protein | CD58_RS16570 | Not Available | Positive | 3933956 - 3934819 | 31924.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
