Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | CD58_RS16485 | Not Available | Positive | 3916001 - 3916795 | 30156.5 |
| lyse family translocator | CD58_RS16490 | Not Available | Positive | 3916859 - 3917485 | 22163.9 |
| eal domain-containing protein | CD58_RS16495 | Not Available | Negative | 3917498 - 3920407 | 108410.0 |
| tetr/acrr family transcriptional regulator | CD58_RS16500 | Not Available | Negative | 3920646 - 3921176 | 20080.1 |
| sdr family oxidoreductase | CD58_RS16505 | Not Available | Positive | 3921345 - 3922226 | 31228.6 |
| mapeg family protein | CD58_RS29335 | Not Available | Positive | 3922339 - 3922731 | 14049.5 |
| opt family oligopeptide transporter | CD58_RS16510 | Not Available | Negative | 3922820 - 3924562 | 61059.9 |
| hypothetical protein | CD58_RS16515 | Not Available | Negative | 3924794 - 3925135 | 12133.7 |
| hypothetical protein | CD58_RS16520 | Not Available | Positive | 3925373 - 3925609 | 9238.01 |
| s8/s53 family peptidase | CD58_RS16525 | Not Available | Positive | 3925717 - 3927483 | 64008.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
