Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | CD58_RS16435 | Not Available | Negative | 3906246 - 3907238 | 35889.7 |
| dna-binding transcriptional regulator kdgr | CD58_RS16440 | Not Available | Positive | 3907393 - 3908175 | 29710.5 |
| alpha/beta fold hydrolase | CD58_RS16445 | Not Available | Negative | 3908196 - 3909104 | 32221.1 |
| dmt family transporter | CD58_RS16450 | Not Available | Negative | 3909091 - 3909999 | 32039.6 |
| flavodoxin family protein | CD58_RS16455 | Not Available | Negative | 3910005 - 3910616 | 22711.4 |
| iron-containing redox enzyme family protein | CD58_RS16460 | Not Available | Negative | 3910620 - 3911303 | 26071.2 |
| hypothetical protein | CD58_RS16465 | Not Available | Negative | 3911305 - 3911850 | 20729.7 |
| phenylacetate--coa ligase family protein | CD58_RS16470 | Not Available | Negative | 3911859 - 3913211 | 50266.3 |
| anthranilate synthase component i family protein | CD58_RS16475 | Not Available | Positive | 3913859 - 3915340 | 55139.3 |
| anthranilate synthase component ii | CD58_RS16480 | Not Available | Positive | 3915337 - 3915921 | 21877.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
