Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine dioxygenase | CD58_RS01205 | Not Available | Negative | 284773 - 285615 | 31777.9 |
| taurine abc transporter permease tauc | CD58_RS01210 | Not Available | Negative | 285666 - 286505 | 29623.1 |
| taurine abc transporter atp-binding subunit | CD58_RS01215 | Not Available | Negative | 286502 - 287296 | 28789.9 |
| taurine abc transporter substrate-binding protein | CD58_RS01220 | Not Available | Negative | 287322 - 288299 | 34573.4 |
| glutamate--cysteine ligase | CD58_RS01225 | Not Available | Negative | 288547 - 290130 | 59173.1 |
| paai family thioesterase | CD58_RS01230 | Not Available | Negative | 290401 - 290784 | 13452.5 |
| tex family protein | CD58_RS01235 | Not Available | Negative | 290784 - 293108 | 84852.7 |
| two-component system response regulator ompr | CD58_RS01240 | Not Available | Positive | 293467 - 294207 | 27389.1 |
| atp-binding protein | CD58_RS01245 | Not Available | Positive | 294321 - 295634 | 48876.2 |
| 30s ribosomal protein s6--l-glutamate ligase | CD58_RS01250 | Not Available | Negative | 295759 - 296664 | 32499.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
