Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | CD58_RS16385 | Not Available | Positive | 3892776 - 3893729 | 36376.7 |
| alpha,alpha-trehalase trea | CD58_RS16390 | Not Available | Negative | 3893838 - 3895466 | 61237.4 |
| zinc-binding alcohol dehydrogenase family protein | CD58_RS16395 | Not Available | Positive | 3895755 - 3896765 | 36580.9 |
| uxaa family hydrolase | CD58_RS16400 | Not Available | Positive | 3896783 - 3898309 | 53312.6 |
| fadr/gntr family transcriptional regulator | CD58_RS16405 | Not Available | Positive | 3898359 - 3899063 | 26139.3 |
| mannonate dehydratase | CD58_RS16410 | Not Available | Negative | 3899911 - 3901086 | 43861.9 |
| mannitol dehydrogenase family protein | CD58_RS16415 | Not Available | Negative | 3901103 - 3902557 | 53068.4 |
| mfs transporter | CD58_RS16420 | Not Available | Negative | 3902575 - 3903867 | 46323.6 |
| zn-dependent oxidoreductase | CD58_RS16425 | Not Available | Negative | 3903946 - 3904977 | 37095.1 |
| d-mannonate dehydratase mand | CD58_RS16430 | Not Available | Negative | 3905030 - 3906241 | 45427.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
