Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS16335 | Not Available | Negative | 3880526 - 3881728 | 42874.0 |
| hypothetical protein | CD58_RS16340 | Not Available | Negative | 3881903 - 3883102 | 42063.0 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS16345 | Not Available | Positive | 3883389 - 3884132 | 25734.0 |
| hypothetical protein | CD58_RS16350 | Not Available | Negative | 3884322 - 3885518 | 42777.2 |
| lysr family transcriptional regulator | CD58_RS16355 | Not Available | Negative | 3885613 - 3886536 | 34602.8 |
| aldo/keto reductase | CD58_RS16360 | Not Available | Positive | 3886649 - 3887644 | 36225.0 |
| methyl-accepting chemotaxis protein | CD58_RS31680 | Not Available | Positive | 3887935 - 3889962 | 73528.4 |
| type 1 glutamine amidotransferase domain-containing protein | CD58_RS16370 | Not Available | Negative | 3890053 - 3890745 | 24783.1 |
| trna (adenine(22)-n(1))-methyltransferase | CD58_RS16375 | Not Available | Negative | 3890837 - 3891532 | 25881.4 |
| response regulator | CD58_RS16380 | Not Available | Positive | 3891726 - 3892772 | 38146.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
