Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS16285 | Not Available | Positive | 3869725 - 3870930 | 44163.5 |
| phosphate abc transporter substrate-binding protein | CD58_RS16290 | Not Available | Positive | 3871011 - 3871379 | 13107.4 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS16295 | Not Available | Negative | 3871400 - 3873772 | 87283.8 |
| threonine dehydratase | CD58_RS16300 | Not Available | Negative | 3874095 - 3875051 | 33886.9 |
| helix-turn-helix transcriptional regulator | CD58_RS16305 | Not Available | Positive | 3875155 - 3875988 | 30335.4 |
| hypothetical protein | CD58_RS16310 | Not Available | Negative | 3876122 - 3877042 | 34609.4 |
| putative selenate abc transporter substrate-binding protein | CD58_RS16315 | Not Available | Positive | 3877279 - 3878130 | 30667.9 |
| phosphonate abc transporter atp-binding protein | CD58_RS16320 | Not Available | Positive | 3878127 - 3878924 | 28418.7 |
| phne/ptxc family abc transporter permease | CD58_RS16325 | Not Available | Positive | 3878918 - 3879745 | 29737.0 |
| phosphonate abc transporter, permease protein phne | CD58_RS16330 | Not Available | Positive | 3879742 - 3880509 | 26866.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
