Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6124 family protein | CD58_RS16235 | Not Available | Positive | 3858095 - 3858457 | 13077.8 |
| amidase | CD58_RS16240 | Not Available | Negative | 3858599 - 3860035 | 50295.0 |
| tetr/acrr family transcriptional regulator | CD58_RS16245 | Not Available | Positive | 3860154 - 3860726 | 21310.7 |
| substrate-binding periplasmic protein | CD58_RS16250 | Not Available | Positive | 3861057 - 3861818 | 28407.3 |
| ggdef domain-containing protein | CD58_RS16255 | Not Available | Positive | 3861820 - 3863163 | 50367.7 |
| substrate-binding periplasmic protein | CD58_RS16260 | Not Available | Positive | 3863188 - 3863922 | 27795.3 |
| dna methylase | CD58_RS16265 | Not Available | Negative | 3864020 - 3864463 | 16650.4 |
| methyl-accepting chemotaxis protein | CD58_RS16270 | Not Available | Negative | 3864551 - 3866512 | 70562.3 |
| cupin | CD58_RS16275 | Not Available | Positive | 3866960 - 3867490 | 19085.4 |
| atp-binding protein | CD58_RS16280 | Not Available | Positive | 3867704 - 3869593 | 68267.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
