Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | CD58_RS16180 | Not Available | Positive | 3844121 - 3845158 | 37366.2 |
| thioredoxin family protein | CD58_RS16185 | Not Available | Positive | 3845180 - 3845416 | 8266.18 |
| glutathione-dependent disulfide-bond oxidoreductase | CD58_RS16190 | Not Available | Positive | 3845595 - 3846434 | 31378.1 |
| gfo/idh/moca family protein | CD58_RS16195 | Not Available | Negative | 3846542 - 3847468 | 33736.3 |
| deor/glpr family dna-binding transcription regulator | CD58_RS16200 | Not Available | Negative | 3847560 - 3848366 | 28588.3 |
| hypothetical protein | CD58_RS16205 | Not Available | Positive | 3849008 - 3849538 | 18571.3 |
| hypothetical protein | CD58_RS16210 | Not Available | Negative | 3849859 - 3851922 | 74855.0 |
| atp-dependent nuclease | CD58_RS16215 | Not Available | Positive | 3852421 - 3854499 | 76852.4 |
| uvrd-helicase domain-containing protein | CD58_RS16220 | Not Available | Positive | 3854492 - 3856246 | 66307.0 |
| hypothetical protein | CD58_RS16230 | Not Available | Positive | 3856861 - 3857295 | 16288.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
