Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | CD58_RS16130 | Not Available | Negative | 3834968 - 3836539 | 58629.1 |
| cytochrome oxidase putative small subunit cydp | CD58_RS31675 | Not Available | Negative | 3836536 - 3836712 | 6499.01 |
| sigma-54 interaction domain-containing protein | CD58_RS16140 | Not Available | Negative | 3836887 - 3838209 | 48822.7 |
| mbl fold metallo-hydrolase | CD58_RS16145 | Not Available | Positive | 3838439 - 3839317 | 32273.3 |
| bifunctional protein tyrosine phosphatase family protein/nad(p)/fad-dependent oxidoreductase | CD58_RS16150 | Not Available | Positive | 3839355 - 3841025 | 60206.5 |
| sulfite exporter taue/safe family protein | CD58_RS16155 | Not Available | Positive | 3841054 - 3841857 | 26921.2 |
| yeee/yede family protein | CD58_RS16160 | Not Available | Positive | 3841888 - 3842322 | 14867.5 |
| duf6691 family protein | CD58_RS16165 | Not Available | Positive | 3842325 - 3842744 | 14729.9 |
| duf2892 domain-containing protein | CD58_RS16170 | Not Available | Positive | 3842758 - 3842943 | 6654.58 |
| arso family nad(p)h-dependent flavin-containing monooxygenase | CD58_RS16175 | Not Available | Positive | 3843014 - 3844093 | 39561.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
