Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | CD58_RS15980 | Not Available | Positive | 3801376 - 3803091 | 60551.8 |
| polysaccharide lyase family 7 protein | CD58_RS15985 | Not Available | Negative | 3803143 - 3803808 | 24995.8 |
| oprd family porin | CD58_RS15990 | Not Available | Positive | 3804149 - 3805510 | 48519.6 |
| lysr family transcriptional regulator | CD58_RS15995 | Not Available | Negative | 3805517 - 3806371 | 31020.8 |
| dmt family transporter | CD58_RS16000 | Not Available | Positive | 3806446 - 3807408 | 34326.7 |
| transcriptional regulator gcva | CD58_RS16005 | Not Available | Negative | 3807400 - 3808326 | 33910.7 |
| glutathione transferase gsta | CD58_RS16010 | Not Available | Positive | 3808475 - 3809086 | 22581.4 |
| lysr substrate-binding domain-containing protein | CD58_RS16015 | Not Available | Negative | 3809123 - 3810031 | 33674.3 |
| dmt family transporter | CD58_RS16020 | Not Available | Positive | 3810125 - 3811108 | 34297.9 |
| eal domain-containing protein | CD58_RS16025 | Not Available | Negative | 3811150 - 3811920 | 28492.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
