Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | CD58_RS15930 | Not Available | Negative | 3787390 - 3789444 | 75435.7 |
| response regulator | CD58_RS15935 | Not Available | Negative | 3790484 - 3790846 | 13026.9 |
| pas domain s-box protein | CD58_RS15940 | Not Available | Negative | 3790843 - 3792645 | 66153.5 |
| response regulator | CD58_RS15945 | Not Available | Positive | 3793160 - 3793810 | 23317.3 |
| hypothetical protein | CD58_RS15950 | Not Available | Positive | 3794182 - 3794697 | 18671.8 |
| hybrid sensor histidine kinase/response regulator | CD58_RS15955 | Not Available | Positive | 3794933 - 3796567 | 60249.0 |
| methyl-accepting chemotaxis protein | CD58_RS15960 | Not Available | Negative | 3796621 - 3797976 | 49387.5 |
| amidohydrolase family protein | CD58_RS15965 | Not Available | Negative | 3798104 - 3798934 | 30588.9 |
| mfs transporter | CD58_RS15970 | Not Available | Negative | 3798959 - 3800251 | 46507.3 |
| gntr family transcriptional regulator | CD58_RS15975 | Not Available | Negative | 3800386 - 3801117 | 27513.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
