Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sfnb family sulfur acquisition oxidoreductase | CD58_RS01155 | Not Available | Negative | 272745 - 273992 | 45227.0 |
| hypothetical protein | CD58_RS01160 | Not Available | Negative | 274320 - 275096 | 27911.7 |
| l-cystine abc transporter atp-binding protein tcyn | CD58_RS01165 | Not Available | Negative | 275602 - 276363 | 27770.9 |
| cystine abc transporter permease | CD58_RS01170 | Not Available | Negative | 276367 - 277032 | 24362.2 |
| cystine abc transporter substrate-binding protein | CD58_RS01175 | Not Available | Negative | 277032 - 277832 | 28940.8 |
| d-cysteine desulfhydrase | CD58_RS01180 | Not Available | Negative | 278141 - 279133 | 35133.3 |
| choline transporter bett | CD58_RS01185 | Not Available | Positive | 279641 - 281602 | 72146.1 |
| sdr family oxidoreductase | CD58_RS01190 | Not Available | Negative | 281615 - 282355 | 26234.5 |
| lysr family transcriptional regulator | CD58_RS01195 | Not Available | Positive | 282488 - 283378 | 33312.4 |
| l-glyceraldehyde 3-phosphate reductase | CD58_RS01200 | Not Available | Positive | 283578 - 284615 | 38079.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
