Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CD58_RS15880 | Not Available | Positive | 3777495 - 3778862 | 49997.1 |
| yopt-type cysteine protease domain-containing protein | CD58_RS15885 | Not Available | Negative | 3778901 - 3779536 | 23304.6 |
| gyri-like domain-containing protein | CD58_RS15890 | Not Available | Positive | 3779746 - 3780615 | 32569.6 |
| aldo/keto reductase | CD58_RS15895 | Not Available | Negative | 3780669 - 3781676 | 35942.0 |
| lysr family transcriptional regulator | CD58_RS15900 | Not Available | Positive | 3781769 - 3782680 | 33042.8 |
| hypothetical protein | CD58_RS15905 | Not Available | Positive | 3782715 - 3783020 | 12002.9 |
| duf488 family protein | CD58_RS15910 | Not Available | Negative | 3782977 - 3783534 | 21082.4 |
| methyl-accepting chemotaxis protein | CD58_RS15915 | Not Available | Positive | 3783757 - 3785400 | 57595.2 |
| hd-gyp domain-containing protein | CD58_RS15920 | Not Available | Positive | 3785515 - 3786738 | 45439.9 |
| hit family protein | CD58_RS15925 | Not Available | Negative | 3786814 - 3787257 | 16382.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
