Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | CD58_RS15830 | Not Available | Negative | 3769732 - 3770301 | 21126.1 |
| winged helix-turn-helix transcriptional regulator | CD58_RS15835 | Not Available | Positive | 3770375 - 3770710 | 12447.0 |
| alpha/beta hydrolase family protein | CD58_RS15840 | Not Available | Positive | 3770762 - 3771802 | 36409.5 |
| metal abc transporter atp-binding protein | CD58_RS15845 | Not Available | Negative | 3771824 - 3772364 | 19141.8 |
| thermostable hemolysin | CD58_RS15850 | Not Available | Positive | 3772568 - 3773245 | 24339.3 |
| amp-binding protein | CD58_RS15855 | Not Available | Positive | 3773235 - 3774716 | 54030.7 |
| tena family transcriptional regulator | CD58_RS15860 | Not Available | Positive | 3774713 - 3775387 | 25063.0 |
| sdr family oxidoreductase | CD58_RS15865 | Not Available | Positive | 3775374 - 3776183 | 28953.3 |
| tetratricopeptide repeat protein | CD58_RS15870 | Not Available | Positive | 3776180 - 3776824 | 23522.0 |
| response regulator | CD58_RS15875 | Not Available | Positive | 3776836 - 3777498 | 24585.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
