Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator gcva | CD58_RS15780 | Not Available | Positive | 3759357 - 3760277 | 33747.3 |
| gnat family n-acetyltransferase | CD58_RS15785 | Not Available | Positive | 3760309 - 3760770 | 16921.2 |
| epoxide hydrolase family protein | CD58_RS15790 | Not Available | Positive | 3760788 - 3761939 | 42403.8 |
| hypothetical protein | CD58_RS15795 | Not Available | Positive | 3762413 - 3762694 | 10017.9 |
| cysteine hydrolase family protein | CD58_RS15800 | Not Available | Positive | 3763084 - 3763602 | 18375.3 |
| isochorismate lyase | CD58_RS15805 | Not Available | Positive | 3763663 - 3763983 | 11936.3 |
| formate dehydrogenase subunit delta | CD58_RS15810 | Not Available | Negative | 3764160 - 3764381 | 8277.98 |
| formate dehydrogenase subunit alpha | CD58_RS15815 | Not Available | Negative | 3764378 - 3767254 | 105044.0 |
| formate dehydrogenase beta subunit | CD58_RS15820 | Not Available | Negative | 3767251 - 3768810 | 54815.0 |
| formate dehydrogenase subunit gamma | CD58_RS15825 | Not Available | Negative | 3768804 - 3769286 | 17404.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
