Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS15730 | Not Available | Positive | 3748994 - 3749371 | 14237.4 |
| gnat family n-acetyltransferase | CD58_RS15735 | Not Available | Positive | 3749393 - 3749905 | 19207.8 |
| thiol-disulfide oxidoreductase dcc family protein | CD58_RS15740 | Not Available | Positive | 3749988 - 3750440 | 17418.2 |
| saccharopine dehydrogenase nadp-binding domain-containing protein | CD58_RS15745 | Not Available | Negative | 3750473 - 3751600 | 39849.0 |
| xylr family transcriptional regulator | CD58_RS15750 | Not Available | Negative | 3751877 - 3753064 | 43254.2 |
| xylose isomerase | CD58_RS15755 | Not Available | Positive | 3753218 - 3754534 | 49101.8 |
| d-xylose abc transporter substrate-binding protein | CD58_RS15760 | Not Available | Positive | 3754751 - 3755752 | 35941.3 |
| d-xylose abc transporter atp-binding protein | CD58_RS15765 | Not Available | Positive | 3755940 - 3757496 | 56403.7 |
| sugar abc transporter permease | CD58_RS15770 | Not Available | Positive | 3757497 - 3758633 | 39992.3 |
| lyse family translocator | CD58_RS15775 | Not Available | Negative | 3758641 - 3759249 | 21458.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
