Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | CD58_RS15680 | Not Available | Negative | 3739118 - 3739999 | 31181.4 |
| abc transporter atp-binding protein | CD58_RS15685 | Not Available | Negative | 3740067 - 3740849 | 29047.3 |
| amp-binding protein | CD58_RS15690 | Not Available | Negative | 3740863 - 3742017 | 43034.6 |
| dimethylsulfone monooxygenase sfng | CD58_RS15695 | Not Available | Negative | 3742032 - 3743129 | 40331.5 |
| fmn reductase | CD58_RS15700 | Not Available | Negative | 3743168 - 3743731 | 20360.7 |
| metal abc transporter atp-binding protein | CD58_RS15705 | Not Available | Positive | 3744107 - 3745351 | 45016.6 |
| lysr family transcriptional regulator | CD58_RS15710 | Not Available | Negative | 3745484 - 3746359 | 31536.5 |
| sdr family oxidoreductase | CD58_RS15715 | Not Available | Positive | 3746480 - 3747529 | 38803.9 |
| histidine phosphatase family protein | CD58_RS15720 | Not Available | Positive | 3747572 - 3748159 | 21852.1 |
| cpbp family intramembrane glutamic endopeptidase | CD58_RS15725 | Not Available | Positive | 3748229 - 3748951 | 26279.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
