Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adec/adek/oprm family multidrug efflux complex outer membrane factor | CD58_RS15585 | Not Available | Positive | 3710599 - 3712023 | 51511.9 |
| hypothetical protein | CD58_RS29305 | Not Available | Positive | 3712030 - 3712236 | 7377.98 |
| oxygen-independent coproporphyrinogen iii oxidase | CD58_RS15590 | Not Available | Negative | 3712423 - 3713811 | 52443.5 |
| coproporphyrinogen iii oxidase | CD58_RS15595 | Not Available | Negative | 3713808 - 3715181 | 50710.3 |
| copd family copper resistance protein | CD58_RS15600 | Not Available | Negative | 3715278 - 3715721 | 16889.6 |
| putative ig domain-containing protein | CD58_RS15605 | Not Available | Positive | 3716129 - 3721741 | 194125.0 |
| hypothetical protein | CD58_RS31130 | Not Available | Negative | 3722412 - 3722567 | 5618.0 |
| tolc family outer membrane protein | CD58_RS15615 | Not Available | Negative | 3722711 - 3724060 | 49263.6 |
| hlyd family type i secretion periplasmic adaptor subunit | CD58_RS15620 | Not Available | Negative | 3724063 - 3725433 | 49234.1 |
| type i secretion system permease/atpase | CD58_RS15625 | Not Available | Negative | 3725426 - 3727147 | 61899.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
