Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is481 family transposase | CD58_RS15530 | Not Available | Negative | 3661192 - 3662316 | 43205.3 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | CD58_RS15540 | Not Available | Negative | 3663612 - 3664223 | 22953.4 |
| mfs transporter | CD58_RS15545 | Not Available | Negative | 3664366 - 3665736 | 48105.7 |
| cupin-like domain-containing protein | CD58_RS15550 | Not Available | Negative | 3665733 - 3666734 | 37871.2 |
| non-ribosomal peptide synthetase | CD58_RS15555 | Not Available | Positive | 3666979 - 3683145 | 591349.0 |
| non-ribosomal peptide synthetase | CD58_RS15560 | Not Available | Positive | 3683150 - 3696727 | 495655.0 |
| glycosyltransferase | CD58_RS15565 | Not Available | Positive | 3699187 - 3700452 | 45872.1 |
| amino acid adenylation domain-containing protein | CD58_RS15570 | Not Available | Positive | 3700558 - 3707859 | 271181.0 |
| fad-dependent monooxygenase | CD58_RS15575 | Not Available | Positive | 3707946 - 3709106 | 41753.0 |
| helix-turn-helix transcriptional regulator | CD58_RS15580 | Not Available | Positive | 3709684 - 3710511 | 30679.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
