Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macb family efflux pump subunit | CD58_RS15480 | Not Available | Negative | 3576736 - 3578697 | 70916.3 |
| macrolide transporter subunit maca | CD58_RS15485 | Not Available | Negative | 3578700 - 3579851 | 41555.0 |
| non-ribosomal peptide synthetase | CD58_RS15490 | Not Available | Negative | 3579930 - 3610874 | 1125790.0 |
| non-ribosomal peptide synthetase | CD58_RS15495 | Not Available | Negative | 3611219 - 3624397 | 479274.0 |
| non-ribosomal peptide synthetase | CD58_RS15500 | Not Available | Negative | 3624394 - 3653496 | 1061260.0 |
| cyclic peptide export abc transporter | CD58_RS15505 | Not Available | Negative | 3653841 - 3655538 | 63111.5 |
| taud/tfda family dioxygenase | CD58_RS15510 | Not Available | Negative | 3655573 - 3656634 | 39278.6 |
| syringomycin e biosynthesis l-threonine--[l-threonyl-carrier protein] ligase syrb1 | CD58_RS15515 | Not Available | Positive | 3656978 - 3658825 | 66190.8 |
| syringomycin e biosynthesis l-threonyl-[l-threonyl-carrier protein] 4-chlorinase syrb2 | CD58_RS15520 | Not Available | Positive | 3658843 - 3659778 | 35451.2 |
| syringomycin e biosynthesis aminoacyltransferase syrc | CD58_RS15525 | Not Available | Positive | 3659841 - 3661052 | 44725.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
