Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS15430 | Not Available | Negative | 3560824 - 3562308 | 54711.6 |
| metal abc transporter atp-binding protein | CD58_RS28785 | Not Available | Positive | 3562501 - 3565151 | 96122.7 |
| luxr family transcriptional regulator | CD58_RS15440 | Not Available | Positive | 3565540 - 3566268 | 27557.9 |
| lyse family translocator | CD58_RS15445 | Not Available | Negative | 3566373 - 3566972 | 21770.3 |
| acyl-homoserine-lactone synthase | CD58_RS15450 | Not Available | Positive | 3567572 - 3568345 | 29373.0 |
| helix-turn-helix transcriptional regulator | CD58_RS15455 | Not Available | Positive | 3568377 - 3569243 | 31891.4 |
| efflux rnd transporter permease subunit | CD58_RS15460 | Not Available | Negative | 3569306 - 3572392 | 110363.0 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS15465 | Not Available | Negative | 3572389 - 3573441 | 37721.3 |
| efflux transporter outer membrane subunit | CD58_RS15470 | Not Available | Negative | 3573489 - 3574916 | 50992.0 |
| diaminobutyrate--2-oxoglutarate transaminase family protein | CD58_RS15475 | Not Available | Positive | 3575208 - 3576548 | 47860.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
