Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing phosphohydrolase | CD58_RS15380 | Not Available | Negative | 3550300 - 3551733 | 51501.4 |
| alpha/beta hydrolase | CD58_RS15385 | Not Available | Positive | 3551848 - 3552609 | 26601.7 |
| gmc family oxidoreductase | CD58_RS15390 | Not Available | Positive | 3552980 - 3554539 | 56083.7 |
| doxx family protein | CD58_RS15395 | Not Available | Positive | 3554696 - 3555109 | 14476.2 |
| lysr substrate-binding domain-containing protein | CD58_RS15400 | Not Available | Negative | 3555303 - 3556229 | 33976.8 |
| nuclear transport factor 2 family protein | CD58_RS15405 | Not Available | Positive | 3556343 - 3556672 | 11932.9 |
| sdr family oxidoreductase | CD58_RS15410 | Not Available | Positive | 3556669 - 3557445 | 27100.7 |
| anthrax toxin-like adenylyl cyclase domain-containing protein | CD58_RS15415 | Not Available | Positive | 3557517 - 3558944 | 51853.8 |
| hypothetical protein | CD58_RS15420 | Not Available | Positive | 3559061 - 3559747 | 24325.2 |
| phosphoribosyltransferase | CD58_RS15425 | Not Available | Positive | 3559883 - 3560839 | 35056.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
