Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrous oxide reductase accessory protein nosl | CD58_RS15175 | Not Available | Negative | 3510427 - 3510954 | 18803.7 |
| abc transporter permease | CD58_RS15180 | Not Available | Negative | 3510985 - 3511815 | 29678.1 |
| abc transporter atp-binding protein | CD58_RS15185 | Not Available | Negative | 3511812 - 3512729 | 33630.9 |
| nitrous oxide reductase family maturation protein nosd | CD58_RS15190 | Not Available | Negative | 3512726 - 3514045 | 48479.1 |
| tat-dependent nitrous-oxide reductase | CD58_RS15195 | Not Available | Negative | 3514072 - 3515991 | 71023.4 |
| transcriptional regulator nosr | CD58_RS15200 | Not Available | Negative | 3516045 - 3518213 | 80640.2 |
| fad-dependent monooxygenase | CD58_RS15205 | Not Available | Positive | 3518593 - 3519723 | 40548.8 |
| hypothetical protein | CD58_RS15215 | Not Available | Negative | 3521026 - 3522363 | 46168.6 |
| transglycosylase slt domain-containing protein | CD58_RS15220 | Not Available | Negative | 3522418 - 3523212 | 27071.8 |
| hypothetical protein | CD58_RS15225 | Not Available | Negative | 3523332 - 3523691 | 13057.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
