Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CD58_RS15125 | Not Available | Positive | 3495042 - 3495851 | 29458.4 |
| abc transporter atp-binding protein | CD58_RS15130 | Not Available | Positive | 3495869 - 3497020 | 41656.0 |
| flavin reductase family protein | CD58_RS15135 | Not Available | Positive | 3497068 - 3497553 | 17255.9 |
| llm class flavin-dependent oxidoreductase | CD58_RS15140 | Not Available | Positive | 3497583 - 3498626 | 39117.9 |
| tonb-dependent siderophore receptor | CD58_RS15145 | Not Available | Negative | 3498830 - 3500944 | 77809.0 |
| methyl-accepting chemotaxis protein | CD58_RS15150 | Not Available | Positive | 3501262 - 3503058 | 65627.2 |
| doxx family protein | CD58_RS15155 | Not Available | Positive | 3503226 - 3503741 | 18666.9 |
| thiamine pyrophosphate-requiring protein | CD58_RS15160 | Not Available | Positive | 3503920 - 3505719 | 65563.1 |
| 2-isopropylmalate synthase | CD58_RS15165 | Not Available | Negative | 3505747 - 3507450 | 62838.1 |
| eal domain-containing protein | CD58_RS15170 | Not Available | Positive | 3507771 - 3510344 | 94461.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
