Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | CD58_RS15075 | Not Available | Positive | 3486597 - 3487430 | 29847.9 |
| aldehyde dehydrogenase | CD58_RS15080 | Not Available | Positive | 3487427 - 3488908 | 52967.4 |
| flavin reductase family protein | CD58_RS15085 | Not Available | Positive | 3488921 - 3489406 | 17154.8 |
| carboxymuconolactone decarboxylase family protein | CD58_RS15090 | Not Available | Positive | 3489601 - 3490005 | 15049.0 |
| gntr family transcriptional regulator | CD58_RS15095 | Not Available | Positive | 3490066 - 3490818 | 27946.8 |
| nudix hydrolase | CD58_RS15100 | Not Available | Positive | 3490820 - 3491383 | 20913.0 |
| duf1330 domain-containing protein | CD58_RS15105 | Not Available | Negative | 3491390 - 3491683 | 10813.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | CD58_RS15110 | Not Available | Positive | 3491766 - 3492875 | 39998.9 |
| abc transporter substrate-binding protein | CD58_RS15115 | Not Available | Positive | 3493084 - 3494109 | 36884.8 |
| abc transporter permease | CD58_RS15120 | Not Available | Positive | 3494094 - 3495035 | 33582.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
