Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mov34/mpn/pad-1 family protein | CD58_RS15030 | Not Available | Negative | 3472594 - 3473001 | 15302.2 |
| molybdopterin-synthase adenylyltransferase moeb | CD58_RS15035 | Not Available | Negative | 3473023 - 3474195 | 42483.2 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | CD58_RS15040 | Not Available | Negative | 3475329 - 3477851 | 91108.3 |
| decarboxylase | CD58_RS15045 | Not Available | Negative | 3477875 - 3480289 | 89139.2 |
| mfs transporter | CD58_RS15050 | Not Available | Negative | 3480301 - 3481593 | 46514.2 |
| methyltransferase | CD58_RS15055 | Not Available | Negative | 3481590 - 3482630 | 37796.4 |
| tonb-dependent receptor | CD58_RS31445 | Not Available | Negative | 3482641 - 3483873 | 46226.3 |
| tonb-dependent receptor | CD58_RS31450 | Not Available | Negative | 3483759 - 3484631 | 30865.5 |
| helix-turn-helix domain-containing protein | CD58_RS15065 | Not Available | Positive | 3484789 - 3485754 | 36058.3 |
| amino acid synthesis family protein | CD58_RS15070 | Not Available | Positive | 3485961 - 3486551 | 21438.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
