Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CD58_RS14980 | Not Available | Negative | 3460810 - 3461307 | 18529.3 |
| transglutaminase domain-containing protein | CD58_RS14985 | Not Available | Negative | 3461535 - 3462332 | 29457.0 |
| alpha-e domain-containing protein | CD58_RS14990 | Not Available | Negative | 3462329 - 3463279 | 35854.4 |
| circularly permuted type 2 atp-grasp protein | CD58_RS14995 | Not Available | Negative | 3463283 - 3464692 | 52346.8 |
| hypothetical protein | CD58_RS15000 | Not Available | Negative | 3465173 - 3466255 | 39006.1 |
| mfs transporter | CD58_RS15005 | Not Available | Negative | 3466252 - 3467457 | 41902.9 |
| acyl-coa dehydrogenase family protein | CD58_RS15010 | Not Available | Negative | 3467454 - 3468674 | 43579.5 |
| class i adenylate-forming enzyme family protein | CD58_RS15015 | Not Available | Negative | 3468668 - 3470317 | 58919.8 |
| coa transferase | CD58_RS15020 | Not Available | Negative | 3470314 - 3472167 | 64785.7 |
| moad family protein | CD58_RS15025 | Not Available | Negative | 3472252 - 3472524 | 10007.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
