Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tsup family transporter | CD58_RS14930 | Not Available | Positive | 3446884 - 3447663 | 27271.6 |
| nad(+) diphosphatase | CD58_RS14935 | Not Available | Negative | 3447631 - 3448461 | 31113.3 |
| crotonase/enoyl-coa hydratase family protein | CD58_RS14940 | Not Available | Negative | 3448468 - 3449280 | 29419.5 |
| efflux transporter outer membrane subunit | CD58_RS14945 | Not Available | Negative | 3449535 - 3451010 | 53403.8 |
| efflux rnd transporter permease subunit | CD58_RS14950 | Not Available | Negative | 3451007 - 3454111 | 112316.0 |
| mdtb/muxb family multidrug efflux rnd transporter permease subunit | CD58_RS14955 | Not Available | Negative | 3454221 - 3457316 | 111081.0 |
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | CD58_RS14960 | Not Available | Negative | 3457313 - 3458626 | 46698.7 |
| thiol peroxidase | CD58_RS14965 | Not Available | Negative | 3458804 - 3459304 | 17436.8 |
| duf3313 domain-containing protein | CD58_RS14970 | Not Available | Negative | 3459451 - 3460122 | 23704.5 |
| hypothetical protein | CD58_RS14975 | Not Available | Negative | 3460216 - 3460710 | 18189.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
