Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nrde family protein | CD58_RS01055 | Not Available | Positive | 251818 - 252564 | 26467.7 |
| phosphoenolpyruvate--protein phosphotransferase | CD58_RS01060 | Not Available | Negative | 252720 - 254999 | 83183.0 |
| rna pyrophosphohydrolase | CD58_RS01065 | Not Available | Negative | 255022 - 255501 | 18893.7 |
| had family hydrolase | CD58_RS01070 | Not Available | Positive | 255657 - 256313 | 24679.3 |
| duf2269 family protein | CD58_RS01075 | Not Available | Negative | 256418 - 256846 | 15367.5 |
| threonine ammonia-lyase, biosynthetic | CD58_RS01080 | Not Available | Negative | 256899 - 258413 | 54876.8 |
| ribose-5-phosphate isomerase rpia | CD58_RS01085 | Not Available | Positive | 258666 - 259340 | 23409.3 |
| sdia-regulated domain-containing protein | CD58_RS01090 | Not Available | Negative | 259478 - 260392 | 34474.3 |
| sdia-regulated domain-containing protein | CD58_RS01095 | Not Available | Negative | 260512 - 261462 | 35474.1 |
| fumarylacetoacetate hydrolase family protein | CD58_RS01100 | Not Available | Negative | 261669 - 262334 | 23582.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
