Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spfh domain-containing protein | CD58_RS14830 | Not Available | Positive | 3429911 - 3430765 | 30987.9 |
| dahl domain-containing protein | CD58_RS14835 | Not Available | Positive | 3431040 - 3432836 | 66935.6 |
| hypothetical protein | CD58_RS14840 | Not Available | Negative | 3432879 - 3433070 | 6894.29 |
| polysaccharide deacetylase family protein | CD58_RS14845 | Not Available | Negative | 3433177 - 3434076 | 33300.6 |
| duf6555 family protein | CD58_RS14850 | Not Available | Positive | 3434271 - 3434525 | 9432.35 |
| hypothetical protein | CD58_RS14855 | Not Available | Positive | 3434677 - 3434907 | 8496.18 |
| hypothetical protein | CD58_RS14860 | Not Available | Positive | 3435029 - 3435454 | 15398.8 |
| pld nuclease n-terminal domain-containing protein | CD58_RS14865 | Not Available | Negative | 3435482 - 3435709 | 8001.0 |
| hypothetical protein | CD58_RS31670 | Not Available | Negative | 3435794 - 3436147 | 13139.6 |
| nudix hydrolase | CD58_RS14875 | Not Available | Positive | 3436276 - 3436638 | 13653.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
