Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | CD58_RS14780 | Not Available | Positive | 3414900 - 3417323 | 83951.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | CD58_RS14785 | Not Available | Positive | 3417616 - 3418530 | 32471.0 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | CD58_RS14790 | Not Available | Positive | 3418709 - 3420334 | 59900.9 |
| dmt family transporter | CD58_RS14795 | Not Available | Negative | 3420353 - 3421246 | 31705.8 |
| lrp/asnc family transcriptional regulator | CD58_RS14800 | Not Available | Positive | 3421380 - 3421817 | 16363.0 |
| hypothetical protein | CD58_RS14805 | Not Available | Negative | 3421860 - 3423209 | 49508.4 |
| bax inhibitor-1/ycca family protein | CD58_RS14810 | Not Available | Negative | 3423609 - 3424280 | 24372.1 |
| Trna-ser | Not Available | Not Available | Positive | 3424405 - 3424492 | Not Available |
| atp-binding protein | CD58_RS14820 | Not Available | Negative | 3424632 - 3428345 | 131454.0 |
| abc transporter substrate-binding protein | CD58_RS14825 | Not Available | Negative | 3428370 - 3429461 | 38114.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
