Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter periplasmic adaptor subunit mexe | CD58_RS14730 | Not Available | Positive | 3400245 - 3401498 | 44640.2 |
| efflux rnd transporter permease subunit | CD58_RS14735 | Not Available | Positive | 3401514 - 3404693 | 114836.0 |
| efflux transporter outer membrane subunit | CD58_RS14740 | Not Available | Positive | 3404690 - 3406111 | 51420.8 |
| transcriptional regulator fear | CD58_RS14745 | Not Available | Negative | 3406232 - 3407194 | 35155.4 |
| duf3156 family protein | CD58_RS14750 | Not Available | Negative | 3407318 - 3407938 | 23070.1 |
| apc family permease | CD58_RS14755 | Not Available | Negative | 3407883 - 3409382 | 53210.5 |
| hypothetical protein | CD58_RS14760 | Not Available | Positive | 3409674 - 3411002 | 48131.8 |
| methyl-accepting chemotaxis protein | CD58_RS31665 | Not Available | Negative | 3411042 - 3412013 | 36548.3 |
| aldehyde dehydrogenase family protein | CD58_RS14770 | Not Available | Positive | 3412222 - 3413709 | 53162.6 |
| endonuclease/exonuclease/phosphatase family protein | CD58_RS14775 | Not Available | Positive | 3413920 - 3414720 | 30544.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
