Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase ii | CD58_RS14680 | Not Available | Negative | 3386783 - 3388069 | 43984.2 |
| efflux rnd transporter permease subunit | CD58_RS14685 | Not Available | Negative | 3388126 - 3391206 | 111859.0 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS14690 | Not Available | Negative | 3391203 - 3392312 | 38439.9 |
| efflux transporter outer membrane subunit | CD58_RS14695 | Not Available | Positive | 3392523 - 3393983 | 51230.6 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS14700 | Not Available | Positive | 3394048 - 3394833 | 28520.2 |
| ompp1/fadl family transporter | CD58_RS14705 | Not Available | Negative | 3394901 - 3396172 | 45513.0 |
| thioesterase family protein | CD58_RS14710 | Not Available | Negative | 3396224 - 3397003 | 27965.4 |
| tetr/acrr family transcriptional regulator | CD58_RS14715 | Not Available | Negative | 3397179 - 3397799 | 23010.5 |
| metal abc transporter atp-binding protein | CD58_RS14720 | Not Available | Negative | 3397948 - 3398939 | 36562.7 |
| substrate-binding periplasmic protein | CD58_RS14725 | Not Available | Positive | 3399281 - 3400045 | 28504.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
