Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | CD58_RS14630 | Not Available | Positive | 3371972 - 3372814 | 30648.6 |
| abc transporter atp-binding protein | CD58_RS14635 | Not Available | Positive | 3372842 - 3373978 | 41276.3 |
| glycoside hydrolase family 32 protein | CD58_RS14640 | Not Available | Positive | 3373975 - 3375477 | 56163.2 |
| laci family dna-binding transcriptional regulator | CD58_RS14645 | Not Available | Positive | 3375553 - 3376545 | 36423.1 |
| voc family protein | CD58_RS14650 | Not Available | Negative | 3376561 - 3376968 | 14867.9 |
| ycii family protein | CD58_RS14655 | Not Available | Negative | 3376992 - 3377417 | 15718.8 |
| m10 family metallopeptidase c-terminal domain-containing protein | CD58_RS31430 | Not Available | Negative | 3377628 - 3382046 | 149909.0 |
| tolc family protein | CD58_RS14665 | Not Available | Negative | 3382159 - 3383490 | 49218.1 |
| hlyd family type i secretion periplasmic adaptor subunit | CD58_RS14670 | Not Available | Negative | 3383492 - 3384811 | 48042.8 |
| type i secretion system permease/atpase | CD58_RS14675 | Not Available | Negative | 3384829 - 3386544 | 61683.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
