Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | CD58_RS14585 | Not Available | Negative | 3358558 - 3359955 | 52151.4 |
| hypothetical protein | CD58_RS14590 | Not Available | Negative | 3360052 - 3361524 | 54742.2 |
| hypothetical protein | CD58_RS30460 | Not Available | Negative | 3361656 - 3361973 | 11587.0 |
| zinc-dependent alcohol dehydrogenase family protein | CD58_RS14595 | Not Available | Negative | 3362217 - 3363242 | 37010.6 |
| lysr family transcriptional regulator | CD58_RS14600 | Not Available | Positive | 3363488 - 3364402 | 33466.5 |
| hypothetical protein | CD58_RS14605 | Not Available | Positive | 3364547 - 3364987 | 15970.4 |
| duf4132 domain-containing protein | CD58_RS14610 | Not Available | Positive | 3365018 - 3367942 | 109997.0 |
| carbohydrate porin | CD58_RS14615 | Not Available | Negative | 3367986 - 3369548 | 57221.4 |
| abc transporter substrate-binding protein | CD58_RS14620 | Not Available | Positive | 3369717 - 3370991 | 46409.0 |
| carbohydrate abc transporter permease | CD58_RS14625 | Not Available | Positive | 3371013 - 3371975 | 35532.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
