Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family outer membrane protein | CD58_RS14535 | Not Available | Negative | 3343978 - 3345327 | 50409.9 |
| hlyd family type i secretion periplasmic adaptor subunit | CD58_RS14540 | Not Available | Negative | 3345342 - 3346688 | 49459.9 |
| type i secretion system permease/atpase | CD58_RS14545 | Not Available | Negative | 3346685 - 3348496 | 64878.0 |
| apri/inh family metalloprotease inhibitor | CD58_RS14550 | Not Available | Negative | 3348646 - 3349068 | 15370.4 |
| serralysin family metalloprotease | CD58_RS14555 | Not Available | Negative | 3349141 - 3350598 | 50330.1 |
| lysr family transcriptional regulator | CD58_RS14560 | Not Available | Negative | 3350932 - 3351837 | 32548.3 |
| metal abc transporter atp-binding protein | CD58_RS14565 | Not Available | Positive | 3351970 - 3353432 | 50815.7 |
| duf1652 domain-containing protein | CD58_RS14570 | Not Available | Positive | 3353626 - 3353904 | 10031.2 |
| uvrd-helicase domain-containing protein | CD58_RS14575 | Not Available | Negative | 3353977 - 3356445 | 92731.1 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | CD58_RS14580 | Not Available | Negative | 3356820 - 3358466 | 58811.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
